Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AP000812.2-201ENST00000538934 718 ntBASIC20.14■□□□□ 0.81
KCNQ3O43525 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.14■□□□□ 0.81
KCNQ3O43525 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.14■□□□□ 0.81
KCNQ3O43525 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KCNQ3O43525 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
KCNQ3O43525 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
KCNQ3O43525 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
KCNQ3O43525 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
KCNQ3O43525 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
KCNQ3O43525 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.13■□□□□ 0.81
KCNQ3O43525 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.13■□□□□ 0.81
KCNQ3O43525 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.13■□□□□ 0.81
KCNQ3O43525 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
KCNQ3O43525 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
KCNQ3O43525 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.13■□□□□ 0.81
KCNQ3O43525 AC026954.1-201ENST00000429771 1293 ntBASIC20.13■□□□□ 0.81
KCNQ3O43525 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.13■□□□□ 0.81
KCNQ3O43525 AC022137.2-201ENST00000503482 481 ntBASIC20.13■□□□□ 0.81
KCNQ3O43525 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.13■□□□□ 0.81
KCNQ3O43525 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.13■□□□□ 0.81
KCNQ3O43525 AC009486.1-201ENST00000569860 813 ntBASIC20.13■□□□□ 0.81
KCNQ3O43525 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.13■□□□□ 0.81
KCNQ3O43525 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.13■□□□□ 0.81
KCNQ3O43525 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KCNQ3O43525 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
KCNQ3O43525 AC022188.1-201ENST00000620960 1664 ntBASIC20.13■□□□□ 0.81
KCNQ3O43525 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
KCNQ3O43525 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KCNQ3O43525 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.12■□□□□ 0.81
KCNQ3O43525 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KCNQ3O43525 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.12■□□□□ 0.81
KCNQ3O43525 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.12■□□□□ 0.81
KCNQ3O43525 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.12■□□□□ 0.81
KCNQ3O43525 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.12■□□□□ 0.81
KCNQ3O43525 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.12■□□□□ 0.81
KCNQ3O43525 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KCNQ3O43525 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KCNQ3O43525 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KCNQ3O43525 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
KCNQ3O43525 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.12■□□□□ 0.81
KCNQ3O43525 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
KCNQ3O43525 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.11■□□□□ 0.81
KCNQ3O43525 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
KCNQ3O43525 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 AL355864.2-201ENST00000447420 863 ntBASIC20.11■□□□□ 0.81
KCNQ3O43525 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.11■□□□□ 0.81
KCNQ3O43525 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.11■□□□□ 0.81
KCNQ3O43525 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KCNQ3O43525 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.11■□□□□ 0.81
KCNQ3O43525 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.11■□□□□ 0.81
KCNQ3O43525 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.11■□□□□ 0.81
KCNQ3O43525 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.11■□□□□ 0.81
KCNQ3O43525 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.11■□□□□ 0.81
KCNQ3O43525 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.11■□□□□ 0.81
KCNQ3O43525 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
KCNQ3O43525 AC093813.1-201ENST00000605066 256 ntBASIC20.11■□□□□ 0.81
KCNQ3O43525 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KCNQ3O43525 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
KCNQ3O43525 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KCNQ3O43525 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.11■□□□□ 0.81
KCNQ3O43525 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.11■□□□□ 0.81
KCNQ3O43525 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KCNQ3O43525 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
KCNQ3O43525 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KCNQ3O43525 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNQ3O43525 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
KCNQ3O43525 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms