Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.17■□□□□ 0.02
CLOCKO15516 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.17■□□□□ 0.02
CLOCKO15516 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLOCKO15516 ELK2BP-201ENST00000415014 1224 ntBASIC15.17■□□□□ 0.02
CLOCKO15516 HCG4-201ENST00000418983 998 ntBASIC15.17■□□□□ 0.02
CLOCKO15516 BX842568.4-201ENST00000421222 227 ntBASIC15.17■□□□□ 0.02
CLOCKO15516 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.17■□□□□ 0.02
CLOCKO15516 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.17■□□□□ 0.02
CLOCKO15516 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.17■□□□□ 0.02
CLOCKO15516 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.17■□□□□ 0.02
CLOCKO15516 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.17■□□□□ 0.02
CLOCKO15516 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.17■□□□□ 0.02
CLOCKO15516 AC140113.2-201ENST00000604370 208 ntBASIC15.17■□□□□ 0.02
CLOCKO15516 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLOCKO15516 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.17■□□□□ 0.02
CLOCKO15516 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CLOCKO15516 AC005593.1-201ENST00000624894 515 ntBASIC15.17■□□□□ 0.02
CLOCKO15516 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.17■□□□□ 0.02
CLOCKO15516 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CLOCKO15516 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
CLOCKO15516 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.17■□□□□ 0.02
CLOCKO15516 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.17■□□□□ 0.02
CLOCKO15516 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLOCKO15516 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.17■□□□□ 0.02
CLOCKO15516 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
CLOCKO15516 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLOCKO15516 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.16■□□□□ 0.02
CLOCKO15516 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.16■□□□□ 0.02
CLOCKO15516 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.16■□□□□ 0.02
CLOCKO15516 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CLOCKO15516 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 PTCHD3P3-201ENST00000403073 906 ntBASIC15.16■□□□□ 0.02
CLOCKO15516 MIR1233-2-201ENST00000408138 82 ntBASIC15.16■□□□□ 0.02
CLOCKO15516 MIR1233-1-201ENST00000408722 82 ntBASIC15.16■□□□□ 0.02
CLOCKO15516 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.16■□□□□ 0.02
CLOCKO15516 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.16■□□□□ 0.02
CLOCKO15516 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 AC145285.3-201ENST00000564603 959 ntBASIC15.16■□□□□ 0.02
CLOCKO15516 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.16■□□□□ 0.02
CLOCKO15516 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CLOCKO15516 AL356488.2-201ENST00000602755 427 ntBASIC15.16■□□□□ 0.02
CLOCKO15516 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.16■□□□□ 0.02
CLOCKO15516 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CLOCKO15516 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.16■□□□□ 0.02
CLOCKO15516 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.16■□□□□ 0.02
CLOCKO15516 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLOCKO15516 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CLOCKO15516 AC090616.6-203ENST00000579186 1945 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 AC006504.4-201ENST00000592118 1568 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLOCKO15516 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.15■□□□□ 0.02
CLOCKO15516 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLOCKO15516 HAUS4P1-201ENST00000406739 1145 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.15■□□□□ 0.02
CLOCKO15516 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.15■□□□□ 0.02
CLOCKO15516 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.15■□□□□ 0.02
CLOCKO15516 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLOCKO15516 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms