Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AP003680.1-201ENST00000598970 3660 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC055876.3-201ENST00000431496 288 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 INGX-202ENST00000489074 768 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 TERF1P3-201ENST00000505638 1227 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC026979.3-201ENST00000607315 403 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AL008721.1-201ENST00000609964 604 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC138649.4-201ENST00000612222 287 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 SPDYE12P-201ENST00000618416 771 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC073592.8-201ENST00000624126 511 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 AL139010.1-201ENST00000454878 894 ntBASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 AC097493.3-201ENST00000509725 367 ntBASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 CETN4P-206ENST00000642099 2168 ntBASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3AQ9Y2J0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms