Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 ARSEP1-201ENST00000420443 635 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 FAM86LP-201ENST00000478302 853 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 TIMM17BP1-201ENST00000545713 516 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AL033527.5-201ENST00000641382 801 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AL442647.2-201ENST00000429864 857 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AC092552.1-201ENST00000547243 906 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 MIR4259-201ENST00000584466 101 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AC018665.1-201ENST00000622927 1362 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 AL162726.2-201ENST00000438986 1017 ntBASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
KIAA1549Q9HCM3 AP003680.1-201ENST00000598970 3660 ntBASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 MEP1AP4-201ENST00000423244 1087 ntBASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.98□□□□□ -0.17
KIAA1549Q9HCM3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms