Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.06■□□□□ 0.32
SNX27Q96L92 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SNX27Q96L92 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 AP006294.1-201ENST00000415407 339 ntBASIC17.06■□□□□ 0.32
SNX27Q96L92 RN7SL399P-201ENST00000471648 279 ntBASIC17.06■□□□□ 0.32
SNX27Q96L92 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX27Q96L92 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX27Q96L92 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX27Q96L92 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.06■□□□□ 0.32
SNX27Q96L92 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SNX27Q96L92 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.06■□□□□ 0.32
SNX27Q96L92 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.06■□□□□ 0.32
SNX27Q96L92 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX27Q96L92 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SNX27Q96L92 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SNX27Q96L92 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SNX27Q96L92 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
SNX27Q96L92 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNX27Q96L92 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX27Q96L92 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SNX27Q96L92 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SNX27Q96L92 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNX27Q96L92 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SNX27Q96L92 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 RAB43P1-201ENST00000561790 589 ntBASIC17.05■□□□□ 0.32
SNX27Q96L92 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX27Q96L92 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.05■□□□□ 0.32
SNX27Q96L92 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.05■□□□□ 0.32
SNX27Q96L92 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SNX27Q96L92 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNX27Q96L92 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX27Q96L92 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX27Q96L92 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SNX27Q96L92 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNX27Q96L92 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX27Q96L92 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX27Q96L92 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX27Q96L92 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNX27Q96L92 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX27Q96L92 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX27Q96L92 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SNX27Q96L92 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 AC112492.5-201ENST00000421897 457 ntBASIC17.04■□□□□ 0.32
SNX27Q96L92 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX27Q96L92 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX27Q96L92 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX27Q96L92 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX27Q96L92 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX27Q96L92 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX27Q96L92 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX27Q96L92 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX27Q96L92 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX27Q96L92 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNX27Q96L92 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SNX27Q96L92 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX27Q96L92 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms