Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 AL121772.3-201ENST00000610840 674 ntBASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 AC079776.2-201ENST00000641154 1609 ntBASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 AC006504.5-208ENST00000588784 2401 ntBASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 BX005266.1-201ENST00000473402 457 ntBASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 AL160237.2-201ENST00000556165 472 ntBASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 LINC01711-201ENST00000598340 967 ntBASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP6Q96FZ7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 SBF1P1-201ENST00000444527 5631 ntBASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 AP001269.4-201ENST00000609611 512 ntBASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 AC015656.1-201ENST00000624209 3578 ntBASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP6Q96FZ7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms