Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 ACTBP8-201ENST00000403258 1108 ntBASIC9.54□□□□□ -0.88
HSPG2P98160 AC010141.1-201ENST00000411585 623 ntBASIC9.54□□□□□ -0.88
HSPG2P98160 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC9.54□□□□□ -0.88
HSPG2P98160 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 AL627230.2-201ENST00000613254 655 ntBASIC9.54□□□□□ -0.88
HSPG2P98160 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 RNF216P1-203ENST00000404404 2427 ntBASIC9.54□□□□□ -0.88
HSPG2P98160 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC9.54□□□□□ -0.88
HSPG2P98160 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 AC134043.2-201ENST00000624206 2238 ntBASIC9.54□□□□□ -0.88
HSPG2P98160 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC9.54□□□□□ -0.88
HSPG2P98160 PHKG1P2-201ENST00000457537 863 ntBASIC9.54□□□□□ -0.88
HSPG2P98160 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC9.54□□□□□ -0.88
HSPG2P98160 PAM16-211ENST00000575848 518 ntTSL 3 BASIC9.54□□□□□ -0.88
HSPG2P98160 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 HPN-206ENST00000597419 1212 ntTSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 AL132994.2-201ENST00000603120 687 ntBASIC9.54□□□□□ -0.88
HSPG2P98160 GPR39-203ENST00000622084 900 ntTSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 VDAC1P1-201ENST00000439229 848 ntBASIC9.54□□□□□ -0.88
HSPG2P98160 MCC-208ENST00000514701 2855 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC9.53□□□□□ -0.88
HSPG2P98160 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 LINC01144-201ENST00000626198 1710 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC026803.1-201ENST00000569130 274 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 AL358472.3-201ENST00000608147 415 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC060834.1-201ENST00000443027 2032 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
HSPG2P98160 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC139713.2-201ENST00000641328 2723 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC9.53□□□□□ -0.88
HSPG2P98160 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC018463.1-201ENST00000456674 917 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 TUBB8P8-201ENST00000458717 1058 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC9.53□□□□□ -0.88
HSPG2P98160 AP000911.2-201ENST00000534330 502 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC004466.1-201ENST00000599515 1080 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC9.53□□□□□ -0.88
HSPG2P98160 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC9.53□□□□□ -0.88
HSPG2P98160 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC9.53□□□□□ -0.88
HSPG2P98160 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
HSPG2P98160 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC9.53□□□□□ -0.88
HSPG2P98160 AC103810.10-201ENST00000606504 343 ntBASIC9.53□□□□□ -0.88
HSPG2P98160 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms