Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.46■□□□□ 0.39
CDK7P50613 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.46■□□□□ 0.39
CDK7P50613 FAM86HP-204ENST00000513466 959 ntBASIC17.46■□□□□ 0.39
CDK7P50613 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDK7P50613 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.46■□□□□ 0.39
CDK7P50613 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDK7P50613 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK7P50613 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDK7P50613 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDK7P50613 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDK7P50613 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDK7P50613 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDK7P50613 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDK7P50613 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK7P50613 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDK7P50613 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK7P50613 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK7P50613 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 UBALD1-205ENST00000590891 2641 ntBASIC17.45■□□□□ 0.38
CDK7P50613 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 MIR326-201ENST00000362220 95 ntBASIC17.45■□□□□ 0.38
CDK7P50613 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK7P50613 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK7P50613 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 AC026410.3-201ENST00000514280 936 ntBASIC17.45■□□□□ 0.38
CDK7P50613 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CDK7P50613 RHOQP1-201ENST00000555758 579 ntBASIC17.45■□□□□ 0.38
CDK7P50613 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK7P50613 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK7P50613 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK7P50613 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDK7P50613 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
CDK7P50613 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDK7P50613 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK7P50613 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK7P50613 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
CDK7P50613 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDK7P50613 AC092506.1-202ENST00000401022 528 ntBASIC17.44■□□□□ 0.38
CDK7P50613 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK7P50613 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK7P50613 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 AC023310.1-201ENST00000554836 735 ntBASIC17.44■□□□□ 0.38
CDK7P50613 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.44■□□□□ 0.38
CDK7P50613 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK7P50613 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK7P50613 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms