Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 AC016734.2-201ENST00000624325 1377 ntBASIC12.62□□□□□ -0.39
CDC34P49427 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.62□□□□□ -0.39
CDC34P49427 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 TPSP2-201ENST00000561760 610 ntBASIC12.62□□□□□ -0.39
CDC34P49427 AC074051.2-201ENST00000565115 352 ntBASIC12.62□□□□□ -0.39
CDC34P49427 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 AP005117.1-201ENST00000584346 1413 ntBASIC12.62□□□□□ -0.39
CDC34P49427 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.62□□□□□ -0.39
CDC34P49427 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
CDC34P49427 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CDC34P49427 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CDC34P49427 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 FGD5P1-202ENST00000614866 2498 ntBASIC12.61□□□□□ -0.39
CDC34P49427 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CDC34P49427 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.61□□□□□ -0.39
CDC34P49427 PTCHD3P3-201ENST00000403073 906 ntBASIC12.61□□□□□ -0.39
CDC34P49427 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.61□□□□□ -0.39
CDC34P49427 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.61□□□□□ -0.39
CDC34P49427 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.61□□□□□ -0.39
CDC34P49427 LINC00265-3P-201ENST00000447588 903 ntBASIC12.61□□□□□ -0.39
CDC34P49427 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.61□□□□□ -0.39
CDC34P49427 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.61□□□□□ -0.39
CDC34P49427 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 AC139887.3-201ENST00000568585 713 ntBASIC12.61□□□□□ -0.39
CDC34P49427 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CDC34P49427 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.61□□□□□ -0.39
CDC34P49427 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 AC126365.1-201ENST00000578585 1514 ntBASIC12.61□□□□□ -0.39
CDC34P49427 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CDC34P49427 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.61□□□□□ -0.39
CDC34P49427 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CDC34P49427 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms