Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 PAUPAR-201ENST00000630360 2965 ntBASIC14.36□□□□□ -0.11
APOBEC1P41238 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 AC105917.1-201ENST00000506637 2539 ntBASIC14.36□□□□□ -0.11
APOBEC1P41238 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.35□□□□□ -0.11
APOBEC1P41238 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.35□□□□□ -0.11
APOBEC1P41238 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.35□□□□□ -0.11
APOBEC1P41238 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 TREML5P-201ENST00000421694 576 ntBASIC14.35□□□□□ -0.11
APOBEC1P41238 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.35□□□□□ -0.11
APOBEC1P41238 RN7SL618P-201ENST00000477850 296 ntBASIC14.35□□□□□ -0.11
APOBEC1P41238 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
APOBEC1P41238 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.35□□□□□ -0.11
APOBEC1P41238 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.35□□□□□ -0.11
APOBEC1P41238 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOBEC1P41238 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 AC087499.5-201ENST00000452760 1342 ntBASIC14.35□□□□□ -0.11
APOBEC1P41238 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.35□□□□□ -0.11
APOBEC1P41238 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APOBEC1P41238 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOBEC1P41238 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
APOBEC1P41238 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOBEC1P41238 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
APOBEC1P41238 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.34□□□□□ -0.11
APOBEC1P41238 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.34□□□□□ -0.11
APOBEC1P41238 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
APOBEC1P41238 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
APOBEC1P41238 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.34□□□□□ -0.11
APOBEC1P41238 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.34□□□□□ -0.11
APOBEC1P41238 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.34□□□□□ -0.11
APOBEC1P41238 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.34□□□□□ -0.11
APOBEC1P41238 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
APOBEC1P41238 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.34□□□□□ -0.11
APOBEC1P41238 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms