Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.16■□□□□ 0.18
NFKB1P19838 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.16■□□□□ 0.18
NFKB1P19838 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.16■□□□□ 0.18
NFKB1P19838 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.16■□□□□ 0.18
NFKB1P19838 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.16■□□□□ 0.18
NFKB1P19838 AP001160.2-201ENST00000596071 487 ntBASIC16.16■□□□□ 0.18
NFKB1P19838 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.16■□□□□ 0.18
NFKB1P19838 AC097359.3-201ENST00000603982 1210 ntBASIC16.16■□□□□ 0.18
NFKB1P19838 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NFKB1P19838 Z92544.3-201ENST00000624747 417 ntBASIC16.16■□□□□ 0.18
NFKB1P19838 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 AC013268.4-201ENST00000637413 2228 ntBASIC16.16■□□□□ 0.18
NFKB1P19838 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.16■□□□□ 0.18
NFKB1P19838 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.16■□□□□ 0.18
NFKB1P19838 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 TSPY26P-202ENST00000565928 3884 ntBASIC16.16■□□□□ 0.18
NFKB1P19838 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
NFKB1P19838 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NFKB1P19838 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
NFKB1P19838 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.15■□□□□ 0.18
NFKB1P19838 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.15■□□□□ 0.18
NFKB1P19838 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.15■□□□□ 0.18
NFKB1P19838 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.15■□□□□ 0.18
NFKB1P19838 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.15■□□□□ 0.18
NFKB1P19838 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.15■□□□□ 0.18
NFKB1P19838 AL079307.3-201ENST00000556114 283 ntBASIC16.15■□□□□ 0.18
NFKB1P19838 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.15■□□□□ 0.18
NFKB1P19838 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.15■□□□□ 0.18
NFKB1P19838 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.15■□□□□ 0.18
NFKB1P19838 AL589739.1-201ENST00000607720 493 ntBASIC16.15■□□□□ 0.18
NFKB1P19838 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.15■□□□□ 0.18
NFKB1P19838 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.15■□□□□ 0.18
NFKB1P19838 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 AC126177.1-201ENST00000547829 2218 ntBASIC16.15■□□□□ 0.18
NFKB1P19838 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.15■□□□□ 0.18
NFKB1P19838 AC090616.6-203ENST00000579186 1945 ntBASIC16.15■□□□□ 0.18
NFKB1P19838 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NFKB1P19838 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NFKB1P19838 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.15■□□□□ 0.18
NFKB1P19838 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NFKB1P19838 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.14■□□□□ 0.18
NFKB1P19838 KRT8P12-202ENST00000472924 1397 ntBASIC16.14■□□□□ 0.17
NFKB1P19838 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NFKB1P19838 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.14■□□□□ 0.17
NFKB1P19838 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.14■□□□□ 0.17
NFKB1P19838 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.14■□□□□ 0.17
NFKB1P19838 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.14■□□□□ 0.17
NFKB1P19838 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NFKB1P19838 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.14■□□□□ 0.17
NFKB1P19838 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.14■□□□□ 0.17
NFKB1P19838 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.14■□□□□ 0.17
NFKB1P19838 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.14■□□□□ 0.17
NFKB1P19838 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.14■□□□□ 0.17
NFKB1P19838 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.14■□□□□ 0.17
NFKB1P19838 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.14■□□□□ 0.17
NFKB1P19838 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NFKB1P19838 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.14■□□□□ 0.17
NFKB1P19838 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NFKB1P19838 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms