Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.18■□□□□ 0.5
TPM2P07951 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM2P07951 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.18■□□□□ 0.5
TPM2P07951 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.18■□□□□ 0.5
TPM2P07951 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.18■□□□□ 0.5
TPM2P07951 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TPM2P07951 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM2P07951 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM2P07951 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM2P07951 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM2P07951 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TPM2P07951 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TPM2P07951 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TPM2P07951 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TPM2P07951 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM2P07951 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM2P07951 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
TPM2P07951 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TPM2P07951 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TPM2P07951 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TPM2P07951 REXO1L1P-202ENST00000608646 1974 ntBASIC18.17■□□□□ 0.5
TPM2P07951 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM2P07951 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM2P07951 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.17■□□□□ 0.5
TPM2P07951 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.17■□□□□ 0.5
TPM2P07951 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 MIR1224-201ENST00000408193 85 ntBASIC18.17■□□□□ 0.5
TPM2P07951 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TPM2P07951 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM2P07951 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM2P07951 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM2P07951 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TPM2P07951 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM2P07951 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TPM2P07951 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM2P07951 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TPM2P07951 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM2P07951 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TPM2P07951 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TPM2P07951 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 AC097376.2-205ENST00000610159 5334 ntBASIC18.16■□□□□ 0.5
TPM2P07951 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TPM2P07951 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TPM2P07951 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM2P07951 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM2P07951 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM2P07951 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TPM2P07951 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM2P07951 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.16■□□□□ 0.5
TPM2P07951 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.16■□□□□ 0.5
TPM2P07951 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM2P07951 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.16■□□□□ 0.5
TPM2P07951 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.16■□□□□ 0.5
TPM2P07951 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.16■□□□□ 0.5
TPM2P07951 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 PGM5P2-202ENST00000637225 1043 ntBASIC18.16■□□□□ 0.5
TPM2P07951 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM2P07951 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TPM2P07951 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM2P07951 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms