Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 AC023024.2-201ENST00000623561 1993 ntBASIC13.53□□□□□ -0.24
CD3DP04234 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 RNU1-129P-201ENST00000384064 167 ntBASIC13.53□□□□□ -0.24
CD3DP04234 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.53□□□□□ -0.24
CD3DP04234 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.53□□□□□ -0.24
CD3DP04234 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 U1.21-201ENST00000580816 167 ntBASIC13.53□□□□□ -0.24
CD3DP04234 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.53□□□□□ -0.24
CD3DP04234 MTDHP3-201ENST00000594186 672 ntBASIC13.53□□□□□ -0.24
CD3DP04234 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
CD3DP04234 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD3DP04234 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.53□□□□□ -0.24
CD3DP04234 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD3DP04234 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CD3DP04234 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.52□□□□□ -0.24
CD3DP04234 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.52□□□□□ -0.24
CD3DP04234 ST20-AS1-201ENST00000560255 4223 ntBASIC13.52□□□□□ -0.24
CD3DP04234 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD3DP04234 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.52□□□□□ -0.25
CD3DP04234 RPS15P9-201ENST00000494093 319 ntBASIC13.52□□□□□ -0.25
CD3DP04234 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.52□□□□□ -0.25
CD3DP04234 AP002469.2-201ENST00000531724 424 ntBASIC13.52□□□□□ -0.25
CD3DP04234 SART3-203ENST00000546611 1184 ntBASIC13.52□□□□□ -0.25
CD3DP04234 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.52□□□□□ -0.25
CD3DP04234 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.52□□□□□ -0.25
CD3DP04234 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.52□□□□□ -0.25
CD3DP04234 AC138894.3-201ENST00000603787 634 ntBASIC13.52□□□□□ -0.25
CD3DP04234 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CD3DP04234 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.52□□□□□ -0.25
CD3DP04234 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
CD3DP04234 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.52□□□□□ -0.25
CD3DP04234 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
CD3DP04234 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CD3DP04234 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.52□□□□□ -0.25
CD3DP04234 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.52□□□□□ -0.25
CD3DP04234 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CD3DP04234 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CD3DP04234 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.52□□□□□ -0.25
CD3DP04234 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CD3DP04234 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.52□□□□□ -0.25
CD3DP04234 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.52□□□□□ -0.25
CD3DP04234 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD3DP04234 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
CD3DP04234 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CD3DP04234 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms