Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.31■□□□□ 0.04
SNPHO15079 MTND2P12-201ENST00000417560 1252 ntBASIC15.31■□□□□ 0.04
SNPHO15079 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.31■□□□□ 0.04
SNPHO15079 FAM58CP-201ENST00000435741 640 ntBASIC15.31■□□□□ 0.04
SNPHO15079 MKNK2P1-201ENST00000437526 628 ntBASIC15.31■□□□□ 0.04
SNPHO15079 AC140658.5-201ENST00000438532 169 ntBASIC15.31■□□□□ 0.04
SNPHO15079 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 AC112482.1-201ENST00000492080 688 ntBASIC15.31■□□□□ 0.04
SNPHO15079 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.31■□□□□ 0.04
SNPHO15079 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC15.31■□□□□ 0.04
SNPHO15079 RN7SKP157-201ENST00000516174 282 ntBASIC15.31■□□□□ 0.04
SNPHO15079 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC15.31■□□□□ 0.04
SNPHO15079 AP002490.2-201ENST00000524791 560 ntBASIC15.31■□□□□ 0.04
SNPHO15079 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 AP002472.1-201ENST00000577490 586 ntBASIC15.31■□□□□ 0.04
SNPHO15079 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 AC013467.2-201ENST00000605472 835 ntBASIC15.31■□□□□ 0.04
SNPHO15079 AL078644.1-201ENST00000609881 752 ntBASIC15.31■□□□□ 0.04
SNPHO15079 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNPHO15079 AC092919.2-201ENST00000623631 1645 ntBASIC15.31■□□□□ 0.04
SNPHO15079 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.31■□□□□ 0.04
SNPHO15079 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNPHO15079 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC15.3■□□□□ 0.04
SNPHO15079 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC15.3■□□□□ 0.04
SNPHO15079 HTR5BP-201ENST00000430851 1154 ntBASIC15.3■□□□□ 0.04
SNPHO15079 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.3■□□□□ 0.04
SNPHO15079 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC15.3■□□□□ 0.04
SNPHO15079 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.3■□□□□ 0.04
SNPHO15079 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.3■□□□□ 0.04
SNPHO15079 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 AC005829.1-201ENST00000570002 483 ntBASIC15.3■□□□□ 0.04
SNPHO15079 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
SNPHO15079 CYP2A7P1-201ENST00000595391 815 ntBASIC15.3■□□□□ 0.04
SNPHO15079 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 AC091812.2-201ENST00000619081 385 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms