Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
NPC1L1Q9UHC9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
NPC1L1Q9UHC9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPC1L1Q9UHC9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.1■□□□□ 0.97
NPC1L1Q9UHC9 AC093813.1-201ENST00000605066 256 ntBASIC21.1■□□□□ 0.97
NPC1L1Q9UHC9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
NPC1L1Q9UHC9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 RN7SL692P-201ENST00000464677 288 ntBASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 AL359711.2-201ENST00000563105 872 ntBASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 AC027307.3-201ENST00000594262 1100 ntBASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPC1L1Q9UHC9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 AC126365.1-201ENST00000578585 1514 ntBASIC21.08■□□□□ 0.97
NPC1L1Q9UHC9 AC087481.3-201ENST00000602886 1894 ntBASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 AL358472.5-202ENST00000641448 1267 ntBASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPC1L1Q9UHC9 BID-213ENST00000615414 2236 ntTSL 5 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 AC134915.1-201ENST00000426461 574 ntBASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 AC005225.4-201ENST00000557330 545 ntBASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms