Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 AL358472.5-202ENST00000641448 1267 ntBASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 MIR8072-201ENST00000614241 80 ntBASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.28■□□□□ 0.68
HMG20BQ9P0W2 AL607033.1-201ENST00000623900 1599 ntBASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 RARRES2P5-201ENST00000564013 466 ntBASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMG20BQ9P0W2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 AC008741.2-201ENST00000612792 3115 ntBASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.27■□□□□ 0.67
HMG20BQ9P0W2 AC063926.2-201ENST00000623766 1308 ntBASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms