Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 AC144831.1-201ENST00000573312 2656 ntBASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 ELK1P1-201ENST00000485699 580 ntBASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 AC025048.3-201ENST00000590609 569 ntBASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 AC093726.1-201ENST00000608064 963 ntBASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 AC005702.4-201ENST00000618393 416 ntBASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPAP1Q9BWH6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 FO393414.2-201ENST00000405153 598 ntBASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 AC017083.2-201ENST00000608069 979 ntBASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 AC011477.6-201ENST00000604980 1927 ntBASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RPAP1Q9BWH6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 MIR1909-201ENST00000411312 80 ntBASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms