Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 MAGEA5-201ENST00000446757 942 ntBASIC18.32■□□□□ 0.52
CDCA5Q96FF9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 AC134698.3-201ENST00000523880 214 ntBASIC18.32■□□□□ 0.52
CDCA5Q96FF9 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 MIR3907-201ENST00000579424 151 ntBASIC18.32■□□□□ 0.52
CDCA5Q96FF9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 AC106820.2-201ENST00000563775 3264 ntBASIC18.32■□□□□ 0.52
CDCA5Q96FF9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.32■□□□□ 0.52
CDCA5Q96FF9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 FTLP1-201ENST00000449155 526 ntBASIC18.31■□□□□ 0.52
CDCA5Q96FF9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.31■□□□□ 0.52
CDCA5Q96FF9 RN7SL11P-201ENST00000471305 293 ntBASIC18.31■□□□□ 0.52
CDCA5Q96FF9 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA5Q96FF9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 TUBBP5-203ENST00000508529 1334 ntBASIC18.3■□□□□ 0.52
CDCA5Q96FF9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.3■□□□□ 0.52
CDCA5Q96FF9 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 ENPP7P14-201ENST00000621765 1040 ntBASIC18.3■□□□□ 0.52
CDCA5Q96FF9 AC079336.7-201ENST00000623428 1078 ntBASIC18.3■□□□□ 0.52
CDCA5Q96FF9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDCA5Q96FF9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms