Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 AC100757.3-201ENST00000622361 1406 ntBASIC17.06■□□□□ 0.32
SEMA4DQ92854 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 MIR6069-201ENST00000620069 79 ntBASIC17.06■□□□□ 0.32
SEMA4DQ92854 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.06■□□□□ 0.32
SEMA4DQ92854 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.06■□□□□ 0.32
SEMA4DQ92854 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 AC055876.3-201ENST00000431496 288 ntBASIC17.05■□□□□ 0.32
SEMA4DQ92854 KRT18P64-201ENST00000434946 1219 ntBASIC17.05■□□□□ 0.32
SEMA4DQ92854 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 RFPL4AP1-201ENST00000530883 850 ntBASIC17.05■□□□□ 0.32
SEMA4DQ92854 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 AC138649.4-201ENST00000612222 287 ntBASIC17.05■□□□□ 0.32
SEMA4DQ92854 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEMA4DQ92854 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SEMA4DQ92854 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 Z97205.2-201ENST00000564697 1639 ntBASIC17.04■□□□□ 0.32
SEMA4DQ92854 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 AC087499.5-201ENST00000452760 1342 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms