Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AP001282.1-201ENST00000531301 1499 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
HMGB4Q8WW32 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AP001889.1-201ENST00000525414 633 ntBASIC15.89■□□□□ 0.13
HMGB4Q8WW32 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AL450472.2-201ENST00000603663 1156 ntBASIC15.89■□□□□ 0.13
HMGB4Q8WW32 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 REXO1L1P-202ENST00000608646 1974 ntBASIC15.89■□□□□ 0.13
HMGB4Q8WW32 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGB4Q8WW32 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 HAUS4P1-201ENST00000406739 1145 ntBASIC15.88■□□□□ 0.13
HMGB4Q8WW32 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 FAM21FP-201ENST00000426241 1131 ntBASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 CSF2RBP1-201ENST00000447905 391 ntBASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 GPR182-203ENST00000622922 591 ntBASIC15.88■□□□□ 0.13
HMGB4Q8WW32 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGB4Q8WW32 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms