Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 EIF5AP2-201ENST00000585668 1047 ntBASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AC004466.1-201ENST00000599515 1080 ntBASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC027139.1-201ENST00000565286 951 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AL008707.1-201ENST00000422498 534 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC006335.1-201ENST00000445200 547 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 RPL18P13-201ENST00000478088 569 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AL136301.1-201ENST00000615830 422 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC051619.9-201ENST00000623237 597 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC005618.3-201ENST00000624928 458 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC074138.1-201ENST00000611182 1303 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 PGAM1P5-201ENST00000548011 764 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC087045.2-201ENST00000606279 1003 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AL157813.1-201ENST00000612996 587 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AC132938.4-201ENST00000623835 848 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 E2F3P2-201ENST00000447755 1422 ntBASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ALMS1Q8TCU4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 NOC2LP1-201ENST00000450578 752 ntBASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 NDUFS6P1-201ENST00000485187 316 ntBASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AC012044.1-201ENST00000603431 297 ntBASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 ISCA2P1-201ENST00000425548 448 ntBASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 RNMTL1P1-201ENST00000454103 560 ntBASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AP002803.1-201ENST00000528836 498 ntBASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 AL161773.1-201ENST00000624845 863 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms