Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 AC020658.6-201ENST00000623564 1870 ntBASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 MTDHP5-201ENST00000598980 586 ntBASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 AL136982.4-201ENST00000437689 1740 ntBASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00346Q8IVM7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 MIR346-201ENST00000362234 95 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 FAM220BP-201ENST00000377689 816 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 HLA-H-201ENST00000383620 1096 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 AL592309.1-201ENST00000443127 649 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 CEND1P1-201ENST00000451006 455 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 AC069335.1-201ENST00000489972 472 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 SLC25A39P2-201ENST00000537614 270 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 AC103702.1-201ENST00000548801 2630 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 LINC01225-203ENST00000563550 1244 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 AC022532.1-201ENST00000624563 1728 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 REXO1L1P-202ENST00000608646 1974 ntBASIC14.11□□□□□ -0.15
LINC00346Q8IVM7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms