Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 CEP164P1-201ENST00000455142 418 ntBASIC10.85□□□□□ -0.67
CSMD3Q7Z407 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 CTBP2P4-201ENST00000513884 920 ntBASIC10.84□□□□□ -0.67
CSMD3Q7Z407 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 CU633904.3-201ENST00000624042 1029 ntBASIC10.84□□□□□ -0.67
CSMD3Q7Z407 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 LY6E-208ENST00000520531 490 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 RN7SL774P-201ENST00000577467 290 ntBASIC10.84□□□□□ -0.67
CSMD3Q7Z407 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 FLJ38576-201ENST00000623820 2459 ntBASIC10.84□□□□□ -0.67
CSMD3Q7Z407 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 CFL1-206ENST00000527344 962 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 AP003680.1-201ENST00000598970 3660 ntBASIC10.84□□□□□ -0.67
CSMD3Q7Z407 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CSMD3Q7Z407 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC012618.1-201ENST00000461223 412 ntBASIC10.83□□□□□ -0.68
CSMD3Q7Z407 COX5BP1-201ENST00000507622 393 ntBASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 BNIP3P13-201ENST00000599968 566 ntBASIC10.83□□□□□ -0.68
CSMD3Q7Z407 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PRSS30P-206ENST00000641773 873 ntBASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms