Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 AL139094.1-201ENST00000405549 1188 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 FXNP2-201ENST00000411625 547 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 NKAIN1P1-201ENST00000435754 582 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 SERPINA13P-202ENST00000478994 924 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 MIR4722-201ENST00000578292 60 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 AC097724.1-201ENST00000609581 426 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 AC007663.3-201ENST00000609632 465 ntBASIC19.67■□□□□ 0.74
RC3H1Q5TC82 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RC3H1Q5TC82 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 CYP46A4P-201ENST00000414953 267 ntBASIC19.66■□□□□ 0.74
RC3H1Q5TC82 FAM8A4P-201ENST00000435433 1213 ntBASIC19.66■□□□□ 0.74
RC3H1Q5TC82 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.66■□□□□ 0.74
RC3H1Q5TC82 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RC3H1Q5TC82 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms