Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 AC024909.3-201ENST00000611513 2257 ntBASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DCAF4L1Q3SXM0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 MIR8072-201ENST00000614241 80 ntBASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 AL513523.2-202ENST00000427283 2040 ntBASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCAF4L1Q3SXM0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 AL121723.1-201ENST00000445194 1519 ntBASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 AL442647.2-201ENST00000429864 857 ntBASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 AC000095.1-201ENST00000603208 874 ntBASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.11■□□□□ 0.33
DCAF4L1Q3SXM0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 AL133267.1-201ENST00000398220 340 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms