Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 SNX29P1-201ENST00000548357 1007 ntBASIC18.86■□□□□ 0.61
PDS5AQ29RF7 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 AP005482.1-201ENST00000563722 1273 ntBASIC18.86■□□□□ 0.61
PDS5AQ29RF7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 ANKRD19P-201ENST00000338192 862 ntBASIC18.85■□□□□ 0.61
PDS5AQ29RF7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 AC092933.1-201ENST00000393644 945 ntBASIC18.85■□□□□ 0.61
PDS5AQ29RF7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 CROCCP4-201ENST00000457096 498 ntBASIC18.85■□□□□ 0.61
PDS5AQ29RF7 AC093433.1-201ENST00000458048 571 ntBASIC18.85■□□□□ 0.61
PDS5AQ29RF7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 AC018695.7-201ENST00000624587 2492 ntBASIC18.85■□□□□ 0.61
PDS5AQ29RF7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDS5AQ29RF7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 MIR658-201ENST00000385210 100 ntBASIC18.84■□□□□ 0.61
PDS5AQ29RF7 AC007274.1-201ENST00000439805 662 ntBASIC18.84■□□□□ 0.61
PDS5AQ29RF7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 COX11-210ENST00000639671 696 ntBASIC18.84■□□□□ 0.61
PDS5AQ29RF7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDS5AQ29RF7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms