Protein–RNA interactions for Protein: Q03468

ERCC6, DNA excision repair protein ERCC-6, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6Q03468 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC26.34■■□□□ 1.81
ERCC6Q03468 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC26.34■■□□□ 1.81
ERCC6Q03468 POLD4-208ENST00000532830 904 ntTSL 3 BASIC26.34■■□□□ 1.81
ERCC6Q03468 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC26.34■■□□□ 1.81
ERCC6Q03468 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ERCC6Q03468 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC26.34■■□□□ 1.81
ERCC6Q03468 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ERCC6Q03468 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ERCC6Q03468 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
ERCC6Q03468 PCDHB18P-201ENST00000524813 2368 ntBASIC26.33■■□□□ 1.81
ERCC6Q03468 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC26.33■■□□□ 1.81
ERCC6Q03468 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC26.33■■□□□ 1.81
ERCC6Q03468 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ERCC6Q03468 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
ERCC6Q03468 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC6Q03468 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC6Q03468 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC6Q03468 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC6Q03468 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC6Q03468 LSM5-207ENST00000410044 687 ntTSL 3 BASIC26.33■■□□□ 1.81
ERCC6Q03468 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC26.33■■□□□ 1.81
ERCC6Q03468 NUDT4P2-201ENST00000578341 546 ntBASIC26.33■■□□□ 1.81
ERCC6Q03468 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC26.33■■□□□ 1.81
ERCC6Q03468 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC6Q03468 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC6Q03468 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC6Q03468 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
ERCC6Q03468 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 BAK1P1-201ENST00000317045 636 ntBASIC26.32■■□□□ 1.8
ERCC6Q03468 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
ERCC6Q03468 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 AC004522.1-201ENST00000419978 654 ntBASIC26.32■■□□□ 1.8
ERCC6Q03468 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 KRT17P4-201ENST00000429445 819 ntBASIC26.32■■□□□ 1.8
ERCC6Q03468 AL627422.1-201ENST00000434104 580 ntBASIC26.32■■□□□ 1.8
ERCC6Q03468 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC26.32■■□□□ 1.8
ERCC6Q03468 AC004837.1-201ENST00000446267 564 ntBASIC26.32■■□□□ 1.8
ERCC6Q03468 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC26.32■■□□□ 1.8
ERCC6Q03468 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC26.32■■□□□ 1.8
ERCC6Q03468 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC26.32■■□□□ 1.8
ERCC6Q03468 NAT9-220ENST00000582870 896 ntTSL 5 BASIC26.32■■□□□ 1.8
ERCC6Q03468 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
ERCC6Q03468 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
ERCC6Q03468 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC26.32■■□□□ 1.8
ERCC6Q03468 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 CLUHP2-201ENST00000426660 1303 ntBASIC26.32■■□□□ 1.8
ERCC6Q03468 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
ERCC6Q03468 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC6Q03468 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ERCC6Q03468 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC26.31■■□□□ 1.8
ERCC6Q03468 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ERCC6Q03468 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
ERCC6Q03468 HNRNPA1P58-201ENST00000403629 610 ntBASIC26.31■■□□□ 1.8
ERCC6Q03468 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC26.31■■□□□ 1.8
ERCC6Q03468 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC26.31■■□□□ 1.8
ERCC6Q03468 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC26.31■■□□□ 1.8
ERCC6Q03468 MIR4472-1-201ENST00000584349 80 ntBASIC26.31■■□□□ 1.8
ERCC6Q03468 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC26.31■■□□□ 1.8
ERCC6Q03468 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
ERCC6Q03468 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ERCC6Q03468 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC26.3■■□□□ 1.8
ERCC6Q03468 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC26.3■■□□□ 1.8
ERCC6Q03468 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC26.3■■□□□ 1.8
ERCC6Q03468 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC26.3■■□□□ 1.8
ERCC6Q03468 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC26.3■■□□□ 1.8
ERCC6Q03468 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 IGHEP1-201ENST00000521393 651 ntBASIC26.3■■□□□ 1.8
ERCC6Q03468 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC26.3■■□□□ 1.8
ERCC6Q03468 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
ERCC6Q03468 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 TNXA-203ENST00000507684 2038 ntBASIC26.3■■□□□ 1.8
ERCC6Q03468 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC6Q03468 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC26.3■■□□□ 1.8
ERCC6Q03468 AP000358.1-201ENST00000456260 156 ntBASIC26.3■■□□□ 1.8
ERCC6Q03468 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 AC008805.1-201ENST00000590892 364 ntBASIC26.3■■□□□ 1.8
ERCC6Q03468 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
ERCC6Q03468 IL9RP3-201ENST00000442856 1674 ntBASIC26.29■■□□□ 1.8
ERCC6Q03468 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ERCC6Q03468 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ERCC6Q03468 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms