Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP4CP60510 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.62■□□□□ 0.57
PPP4CP60510 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PPP4CP60510 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 AC084018.2-201ENST00000613093 2607 ntBASIC18.62■□□□□ 0.57
PPP4CP60510 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.62■□□□□ 0.57
PPP4CP60510 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.62■□□□□ 0.57
PPP4CP60510 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.62■□□□□ 0.57
PPP4CP60510 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.62■□□□□ 0.57
PPP4CP60510 RPS2P32-201ENST00000439199 892 ntBASIC18.62■□□□□ 0.57
PPP4CP60510 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.62■□□□□ 0.57
PPP4CP60510 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 AC022137.2-201ENST00000503482 481 ntBASIC18.62■□□□□ 0.57
PPP4CP60510 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PPP4CP60510 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.62■□□□□ 0.57
PPP4CP60510 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.62■□□□□ 0.57
PPP4CP60510 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.62■□□□□ 0.57
PPP4CP60510 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.62■□□□□ 0.57
PPP4CP60510 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.62■□□□□ 0.57
PPP4CP60510 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.62■□□□□ 0.57
PPP4CP60510 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.62■□□□□ 0.57
PPP4CP60510 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 MSTO2P-201ENST00000314835 1709 ntBASIC18.62■□□□□ 0.57
PPP4CP60510 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PPP4CP60510 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP4CP60510 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PPP4CP60510 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PPP4CP60510 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 AC134312.5-201ENST00000568031 1313 ntBASIC18.61■□□□□ 0.57
PPP4CP60510 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.61■□□□□ 0.57
PPP4CP60510 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.61■□□□□ 0.57
PPP4CP60510 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.61■□□□□ 0.57
PPP4CP60510 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 BCRP2-202ENST00000447763 634 ntBASIC18.61■□□□□ 0.57
PPP4CP60510 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.61■□□□□ 0.57
PPP4CP60510 BCRP6-201ENST00000510112 632 ntBASIC18.61■□□□□ 0.57
PPP4CP60510 BCRP7-201ENST00000511549 544 ntBASIC18.61■□□□□ 0.57
PPP4CP60510 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.61■□□□□ 0.57
PPP4CP60510 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.61■□□□□ 0.57
PPP4CP60510 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.61■□□□□ 0.57
PPP4CP60510 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.61■□□□□ 0.57
PPP4CP60510 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PPP4CP60510 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PPP4CP60510 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PPP4CP60510 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPP4CP60510 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PPP4CP60510 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.6■□□□□ 0.57
PPP4CP60510 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPP4CP60510 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPP4CP60510 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.6■□□□□ 0.57
PPP4CP60510 AL138799.1-201ENST00000448213 1675 ntBASIC18.6■□□□□ 0.57
PPP4CP60510 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PPP4CP60510 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.6■□□□□ 0.57
PPP4CP60510 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PPP4CP60510 PDIA3P1-201ENST00000471856 1510 ntBASIC18.6■□□□□ 0.57
PPP4CP60510 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PPP4CP60510 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PPP4CP60510 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PPP4CP60510 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms