Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 AC098850.1-201ENST00000419919 790 ntBASIC14.19□□□□□ -0.14
GFRA1P56159 MYCLP2-201ENST00000449268 967 ntBASIC14.19□□□□□ -0.14
GFRA1P56159 RN7SL399P-201ENST00000471648 279 ntBASIC14.19□□□□□ -0.14
GFRA1P56159 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
GFRA1P56159 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
GFRA1P56159 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.19□□□□□ -0.14
GFRA1P56159 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.19□□□□□ -0.14
GFRA1P56159 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.19□□□□□ -0.14
GFRA1P56159 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GFRA1P56159 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.19□□□□□ -0.14
GFRA1P56159 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.19□□□□□ -0.14
GFRA1P56159 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GFRA1P56159 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFRA1P56159 CLK3P2-201ENST00000427566 1453 ntBASIC14.18□□□□□ -0.14
GFRA1P56159 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GFRA1P56159 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
GFRA1P56159 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.18□□□□□ -0.14
GFRA1P56159 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.18□□□□□ -0.14
GFRA1P56159 WASH4P-201ENST00000564273 1246 ntBASIC14.18□□□□□ -0.14
GFRA1P56159 AC036164.1-201ENST00000570544 333 ntBASIC14.18□□□□□ -0.14
GFRA1P56159 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.18□□□□□ -0.14
GFRA1P56159 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 MIR8072-201ENST00000614241 80 ntBASIC14.18□□□□□ -0.14
GFRA1P56159 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.18□□□□□ -0.14
GFRA1P56159 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.18□□□□□ -0.14
GFRA1P56159 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GFRA1P56159 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
GFRA1P56159 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFRA1P56159 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.18□□□□□ -0.14
GFRA1P56159 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.17□□□□□ -0.14
GFRA1P56159 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 DOC2GP-204ENST00000639052 2548 ntBASIC14.17□□□□□ -0.14
GFRA1P56159 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GFRA1P56159 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.17□□□□□ -0.14
GFRA1P56159 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.17□□□□□ -0.14
GFRA1P56159 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
GFRA1P56159 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.17□□□□□ -0.14
GFRA1P56159 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.17□□□□□ -0.14
GFRA1P56159 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GFRA1P56159 AC098614.1-201ENST00000368528 745 ntBASIC14.17□□□□□ -0.14
GFRA1P56159 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 COX5BP8-201ENST00000416911 349 ntBASIC14.17□□□□□ -0.14
GFRA1P56159 NME2P1-201ENST00000426182 414 ntBASIC14.17□□□□□ -0.14
GFRA1P56159 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.17□□□□□ -0.14
GFRA1P56159 GAPDHP21-201ENST00000450301 1010 ntBASIC14.17□□□□□ -0.14
GFRA1P56159 ELK1P1-201ENST00000485699 580 ntBASIC14.17□□□□□ -0.14
GFRA1P56159 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFRA1P56159 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.17□□□□□ -0.14
GFRA1P56159 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.17□□□□□ -0.14
GFRA1P56159 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.17□□□□□ -0.14
GFRA1P56159 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.17□□□□□ -0.14
GFRA1P56159 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.17□□□□□ -0.14
GFRA1P56159 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.17□□□□□ -0.14
GFRA1P56159 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms