Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC026410.1-201ENST00000507366 1101 ntBASIC17.45■□□□□ 0.38
HTTP42858 EIF5AP2-201ENST00000585668 1047 ntBASIC17.45■□□□□ 0.38
HTTP42858 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HTTP42858 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HTTP42858 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 AL645608.8-201ENST00000606034 2086 ntBASIC17.44■□□□□ 0.38
HTTP42858 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HTTP42858 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.44■□□□□ 0.38
HTTP42858 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 AC006335.1-201ENST00000445200 547 ntBASIC17.44■□□□□ 0.38
HTTP42858 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.44■□□□□ 0.38
HTTP42858 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.44■□□□□ 0.38
HTTP42858 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.44■□□□□ 0.38
HTTP42858 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 AC012362.1-201ENST00000434906 739 ntBASIC17.44■□□□□ 0.38
HTTP42858 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.44■□□□□ 0.38
HTTP42858 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.44■□□□□ 0.38
HTTP42858 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.44■□□□□ 0.38
HTTP42858 AL022344.2-201ENST00000568976 968 ntBASIC17.44■□□□□ 0.38
HTTP42858 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HTTP42858 LINC01144-201ENST00000626198 1710 ntBASIC17.44■□□□□ 0.38
HTTP42858 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTTP42858 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 ACTBP8-201ENST00000403258 1108 ntBASIC17.43■□□□□ 0.38
HTTP42858 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 AL391280.1-201ENST00000506969 1062 ntBASIC17.43■□□□□ 0.38
HTTP42858 AL160314.3-201ENST00000556041 767 ntBASIC17.43■□□□□ 0.38
HTTP42858 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.43■□□□□ 0.38
HTTP42858 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.43■□□□□ 0.38
HTTP42858 RN7SL596P-201ENST00000582123 288 ntBASIC17.43■□□□□ 0.38
HTTP42858 BX539320.1-201ENST00000623759 877 ntBASIC17.43■□□□□ 0.38
HTTP42858 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HTTP42858 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 AL133267.1-201ENST00000398220 340 ntBASIC17.43■□□□□ 0.38
HTTP42858 AC011742.3-201ENST00000439053 820 ntBASIC17.43■□□□□ 0.38
HTTP42858 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 AP001002.3-201ENST00000623482 206 ntBASIC17.43■□□□□ 0.38
HTTP42858 AC004923.1-202ENST00000642106 209 ntBASIC17.43■□□□□ 0.38
HTTP42858 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 KRT8P4-201ENST00000509735 1454 ntBASIC17.43■□□□□ 0.38
HTTP42858 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.43■□□□□ 0.38
HTTP42858 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HTTP42858 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 AL008707.1-201ENST00000422498 534 ntBASIC17.43■□□□□ 0.38
HTTP42858 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.43■□□□□ 0.38
HTTP42858 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 NDUFS6P1-201ENST00000485187 316 ntBASIC17.43■□□□□ 0.38
HTTP42858 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.43■□□□□ 0.38
HTTP42858 MIR4783-201ENST00000580343 82 ntBASIC17.43■□□□□ 0.38
HTTP42858 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.43■□□□□ 0.38
HTTP42858 AC051619.9-201ENST00000623237 597 ntBASIC17.43■□□□□ 0.38
HTTP42858 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.43■□□□□ 0.38
HTTP42858 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTTP42858 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.42■□□□□ 0.38
HTTP42858 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 AC078991.1-201ENST00000437297 610 ntBASIC17.42■□□□□ 0.38
HTTP42858 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.42■□□□□ 0.38
HTTP42858 AC068587.8-201ENST00000641239 219 ntBASIC17.42■□□□□ 0.38
HTTP42858 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.42■□□□□ 0.38
HTTP42858 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.42■□□□□ 0.38
HTTP42858 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HTTP42858 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.42■□□□□ 0.38
HTTP42858 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.42■□□□□ 0.38
HTTP42858 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.42■□□□□ 0.38
HTTP42858 ZACNP1-201ENST00000612259 710 ntBASIC17.42■□□□□ 0.38
HTTP42858 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTTP42858 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.42■□□□□ 0.38
HTTP42858 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.42■□□□□ 0.38
HTTP42858 AC007787.1-201ENST00000588095 1583 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms