Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 RPS8P6-201ENST00000426177 609 ntBASIC16.14■□□□□ 0.17
HADHAP40939 FAM58DP-201ENST00000428076 619 ntBASIC16.14■□□□□ 0.17
HADHAP40939 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.14■□□□□ 0.17
HADHAP40939 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.14■□□□□ 0.17
HADHAP40939 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.14■□□□□ 0.17
HADHAP40939 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.14■□□□□ 0.17
HADHAP40939 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HADHAP40939 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.14■□□□□ 0.17
HADHAP40939 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HADHAP40939 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.14■□□□□ 0.17
HADHAP40939 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.14■□□□□ 0.17
HADHAP40939 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHAP40939 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HADHAP40939 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.13■□□□□ 0.17
HADHAP40939 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.13■□□□□ 0.17
HADHAP40939 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HADHAP40939 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 AL353705.2-201ENST00000428243 662 ntBASIC16.13■□□□□ 0.17
HADHAP40939 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.13■□□□□ 0.17
HADHAP40939 RBPMS2P1-201ENST00000437762 623 ntBASIC16.13■□□□□ 0.17
HADHAP40939 AL139010.1-201ENST00000454878 894 ntBASIC16.13■□□□□ 0.17
HADHAP40939 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.13■□□□□ 0.17
HADHAP40939 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.13■□□□□ 0.17
HADHAP40939 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.13■□□□□ 0.17
HADHAP40939 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.13■□□□□ 0.17
HADHAP40939 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
HADHAP40939 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
HADHAP40939 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.13■□□□□ 0.17
HADHAP40939 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HADHAP40939 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHAP40939 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHAP40939 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.12■□□□□ 0.17
HADHAP40939 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.12■□□□□ 0.17
HADHAP40939 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.12■□□□□ 0.17
HADHAP40939 DNAJB3-202ENST00000449667 1266 ntBASIC16.12■□□□□ 0.17
HADHAP40939 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HADHAP40939 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 AC018529.1-201ENST00000613063 361 ntBASIC16.12■□□□□ 0.17
HADHAP40939 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.12■□□□□ 0.17
HADHAP40939 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HADHAP40939 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms