Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CICP13-201ENST00000422015 2789 ntBASIC15.67■□□□□ 0.1
CDH3P22223 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 AL512638.1-201ENST00000457493 794 ntBASIC15.67■□□□□ 0.1
CDH3P22223 POU5F1P6-201ENST00000466990 990 ntBASIC15.67■□□□□ 0.1
CDH3P22223 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 INGX-202ENST00000489074 768 ntBASIC15.67■□□□□ 0.1
CDH3P22223 AC097493.3-201ENST00000509725 367 ntBASIC15.67■□□□□ 0.1
CDH3P22223 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 AC027369.6-201ENST00000525520 931 ntBASIC15.67■□□□□ 0.1
CDH3P22223 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH3P22223 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH3P22223 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDH3P22223 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH3P22223 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.67■□□□□ 0.1
CDH3P22223 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH3P22223 AL009178.2-201ENST00000597278 2719 ntBASIC15.67■□□□□ 0.1
CDH3P22223 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDH3P22223 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 AL365203.3-201ENST00000609742 2057 ntBASIC15.67■□□□□ 0.1
CDH3P22223 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH3P22223 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH3P22223 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH3P22223 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDH3P22223 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH3P22223 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 AC104581.4-201ENST00000623126 3052 ntBASIC15.66■□□□□ 0.1
CDH3P22223 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH3P22223 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH3P22223 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH3P22223 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH3P22223 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.66■□□□□ 0.1
CDH3P22223 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH3P22223 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH3P22223 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CDH3P22223 BCRP1-201ENST00000444246 691 ntBASIC15.66■□□□□ 0.1
CDH3P22223 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH3P22223 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH3P22223 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH3P22223 AC105021.1-202ENST00000570572 669 ntBASIC15.66■□□□□ 0.1
CDH3P22223 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH3P22223 AL096865.1-201ENST00000606796 927 ntBASIC15.66■□□□□ 0.1
CDH3P22223 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH3P22223 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH3P22223 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH3P22223 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDH3P22223 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH3P22223 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms