Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RAB4AP20338 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 FAM8A6P-201ENST00000407496 1135 ntBASIC12.28□□□□□ -0.44
RAB4AP20338 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 ZNF444P1-201ENST00000559497 298 ntBASIC12.28□□□□□ -0.44
RAB4AP20338 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.28□□□□□ -0.44
RAB4AP20338 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 MBLAC2-202ENST00000514906 1936 ntBASIC12.28□□□□□ -0.44
RAB4AP20338 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB4AP20338 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 AP001972.5-201ENST00000624624 2338 ntBASIC12.28□□□□□ -0.44
RAB4AP20338 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB4AP20338 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 DNM1P41-201ENST00000623634 3350 ntBASIC12.28□□□□□ -0.44
RAB4AP20338 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 TMBIM7P-203ENST00000641617 1718 ntBASIC12.28□□□□□ -0.44
RAB4AP20338 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB4AP20338 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RAB4AP20338 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB4AP20338 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
RAB4AP20338 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
RAB4AP20338 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB4AP20338 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB4AP20338 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
RAB4AP20338 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RAB4AP20338 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.27□□□□□ -0.44
RAB4AP20338 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB4AP20338 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB4AP20338 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.27□□□□□ -0.45
RAB4AP20338 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB4AP20338 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB4AP20338 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 AL158047.1-201ENST00000445918 881 ntBASIC12.27□□□□□ -0.45
RAB4AP20338 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB4AP20338 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 NAPSB-206ENST00000562112 1266 ntBASIC12.27□□□□□ -0.45
RAB4AP20338 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB4AP20338 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB4AP20338 AC010947.1-201ENST00000623454 693 ntBASIC12.27□□□□□ -0.45
RAB4AP20338 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 AC141257.4-201ENST00000634557 245 ntBASIC12.27□□□□□ -0.45
RAB4AP20338 AC136944.6-201ENST00000634818 245 ntBASIC12.27□□□□□ -0.45
RAB4AP20338 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms