Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.5■□□□□ 0.39
SMPD1P17405 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SMPD1P17405 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SMPD1P17405 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.5■□□□□ 0.39
SMPD1P17405 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 FAM197Y7-201ENST00000432892 766 ntBASIC17.5■□□□□ 0.39
SMPD1P17405 AC245100.3-201ENST00000441281 285 ntBASIC17.5■□□□□ 0.39
SMPD1P17405 ZNF767P-206ENST00000513792 565 ntBASIC17.5■□□□□ 0.39
SMPD1P17405 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.5■□□□□ 0.39
SMPD1P17405 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.5■□□□□ 0.39
SMPD1P17405 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMPD1P17405 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SMPD1P17405 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.5■□□□□ 0.39
SMPD1P17405 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.5■□□□□ 0.39
SMPD1P17405 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SMPD1P17405 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.49■□□□□ 0.39
SMPD1P17405 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SMPD1P17405 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMPD1P17405 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 AL138799.1-201ENST00000448213 1675 ntBASIC17.49■□□□□ 0.39
SMPD1P17405 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SMPD1P17405 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 AC006001.1-201ENST00000325130 474 ntBASIC17.49■□□□□ 0.39
SMPD1P17405 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.49■□□□□ 0.39
SMPD1P17405 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.49■□□□□ 0.39
SMPD1P17405 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.49■□□□□ 0.39
SMPD1P17405 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.49■□□□□ 0.39
SMPD1P17405 AC078819.1-201ENST00000547454 765 ntBASIC17.49■□□□□ 0.39
SMPD1P17405 AC012085.1-201ENST00000548270 765 ntBASIC17.49■□□□□ 0.39
SMPD1P17405 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.49■□□□□ 0.39
SMPD1P17405 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.49■□□□□ 0.39
SMPD1P17405 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.49■□□□□ 0.39
SMPD1P17405 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.49■□□□□ 0.39
SMPD1P17405 AC145423.3-201ENST00000615987 467 ntBASIC17.49■□□□□ 0.39
SMPD1P17405 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMPD1P17405 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SMPD1P17405 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.49■□□□□ 0.39
SMPD1P17405 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMPD1P17405 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
SMPD1P17405 AL138709.1-201ENST00000614840 1693 ntBASIC17.48■□□□□ 0.39
SMPD1P17405 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SMPD1P17405 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.48■□□□□ 0.39
SMPD1P17405 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 BCYRN1-201ENST00000418539 200 ntBASIC17.48■□□□□ 0.39
SMPD1P17405 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SMPD1P17405 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.48■□□□□ 0.39
SMPD1P17405 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.48■□□□□ 0.39
SMPD1P17405 MIR3615-201ENST00000581999 87 ntBASIC17.48■□□□□ 0.39
SMPD1P17405 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.48■□□□□ 0.39
SMPD1P17405 AC091271.1-201ENST00000611877 1162 ntBASIC17.48■□□□□ 0.39
SMPD1P17405 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.48■□□□□ 0.39
SMPD1P17405 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.48■□□□□ 0.39
SMPD1P17405 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMPD1P17405 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.48■□□□□ 0.39
SMPD1P17405 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.48■□□□□ 0.39
SMPD1P17405 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
SMPD1P17405 AL596087.1-201ENST00000400979 1969 ntBASIC17.48■□□□□ 0.39
SMPD1P17405 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMPD1P17405 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms