Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CSB-PGBD3P0DP91 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CSB-PGBD3P0DP91 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSB-PGBD3P0DP91 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSB-PGBD3P0DP91 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSB-PGBD3P0DP91 AC012313.1-201ENST00000593393 3059 ntBASIC20.89■□□□□ 0.94
CSB-PGBD3P0DP91 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.89■□□□□ 0.94
CSB-PGBD3P0DP91 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSB-PGBD3P0DP91 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 IGHJ2P-201ENST00000454480 60 ntBASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 RHOQP1-201ENST00000555758 579 ntBASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSB-PGBD3P0DP91 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 ALOX12P2-203ENST00000570921 1945 ntBASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 AC006001.1-201ENST00000325130 474 ntBASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 AC092506.1-202ENST00000401022 528 ntBASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 BTBD6P1-201ENST00000412176 1267 ntBASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 AC007969.1-201ENST00000433675 447 ntBASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 KRT18P25-201ENST00000508931 1278 ntBASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.88■□□□□ 0.93
CSB-PGBD3P0DP91 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms