Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 AC063926.2-201ENST00000623766 1308 ntBASIC17.47■□□□□ 0.39
SRGAP2CP0DJJ0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 NME2P1-201ENST00000426182 414 ntBASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 KRT18P64-201ENST00000434946 1219 ntBASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 MYCLP2-201ENST00000449268 967 ntBASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 HNRNPUP1-201ENST00000554987 333 ntBASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.46■□□□□ 0.39
SRGAP2CP0DJJ0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.46■□□□□ 0.38
SRGAP2CP0DJJ0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AL607033.1-201ENST00000623900 1599 ntBASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AC011477.6-201ENST00000604980 1927 ntBASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AC123567.1-201ENST00000548294 1261 ntBASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.45■□□□□ 0.38
SRGAP2CP0DJJ0 AC138969.3-201ENST00000546612 1459 ntBASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 AC138932.2-201ENST00000548268 1459 ntBASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 AC126755.4-201ENST00000549796 1459 ntBASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 AC069224.1-201ENST00000566372 1715 ntBASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 AC136604.1-201ENST00000418535 575 ntBASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 AC098850.1-201ENST00000419919 790 ntBASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 GAPDHP21-201ENST00000450301 1010 ntBASIC17.44■□□□□ 0.38
SRGAP2CP0DJJ0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms