Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TIMP1P01033 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 AC148477.4-201ENST00000613430 1793 ntBASIC16.92■□□□□ 0.3
TIMP1P01033 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.92■□□□□ 0.3
TIMP1P01033 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.92■□□□□ 0.3
TIMP1P01033 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TIMP1P01033 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TIMP1P01033 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.92■□□□□ 0.3
TIMP1P01033 FAM8A4P-201ENST00000435433 1213 ntBASIC16.92■□□□□ 0.3
TIMP1P01033 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.92■□□□□ 0.3
TIMP1P01033 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.92■□□□□ 0.3
TIMP1P01033 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.92■□□□□ 0.3
TIMP1P01033 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.92■□□□□ 0.3
TIMP1P01033 FGFR3P5-201ENST00000564496 886 ntBASIC16.92■□□□□ 0.3
TIMP1P01033 RN7SL774P-201ENST00000577467 290 ntBASIC16.92■□□□□ 0.3
TIMP1P01033 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TIMP1P01033 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.92■□□□□ 0.3
TIMP1P01033 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.92■□□□□ 0.3
TIMP1P01033 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.92■□□□□ 0.3
TIMP1P01033 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.92■□□□□ 0.3
TIMP1P01033 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TIMP1P01033 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.92■□□□□ 0.3
TIMP1P01033 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.92■□□□□ 0.3
TIMP1P01033 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.92■□□□□ 0.3
TIMP1P01033 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.92■□□□□ 0.3
TIMP1P01033 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.92■□□□□ 0.3
TIMP1P01033 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TIMP1P01033 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMP1P01033 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TIMP1P01033 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TIMP1P01033 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TIMP1P01033 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.91■□□□□ 0.3
TIMP1P01033 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.91■□□□□ 0.3
TIMP1P01033 RN7SL11P-201ENST00000471305 293 ntBASIC16.91■□□□□ 0.3
TIMP1P01033 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.91■□□□□ 0.3
TIMP1P01033 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.91■□□□□ 0.3
TIMP1P01033 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.91■□□□□ 0.3
TIMP1P01033 PRSS30P-206ENST00000641773 873 ntBASIC16.91■□□□□ 0.3
TIMP1P01033 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
TIMP1P01033 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TIMP1P01033 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TIMP1P01033 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.91■□□□□ 0.3
TIMP1P01033 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TIMP1P01033 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TIMP1P01033 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.9■□□□□ 0.3
TIMP1P01033 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.9■□□□□ 0.3
TIMP1P01033 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TIMP1P01033 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TIMP1P01033 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TIMP1P01033 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms