Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.23□□□□□ -0.13
CXCL13O43927 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL13O43927 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.23□□□□□ -0.13
CXCL13O43927 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.23□□□□□ -0.13
CXCL13O43927 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.23□□□□□ -0.13
CXCL13O43927 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.23□□□□□ -0.13
CXCL13O43927 AC104794.3-201ENST00000566840 1248 ntBASIC14.23□□□□□ -0.13
CXCL13O43927 MIR3197-201ENST00000582241 73 ntBASIC14.23□□□□□ -0.13
CXCL13O43927 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL13O43927 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL13O43927 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.23□□□□□ -0.13
CXCL13O43927 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.23□□□□□ -0.13
CXCL13O43927 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.23□□□□□ -0.13
CXCL13O43927 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.23□□□□□ -0.13
CXCL13O43927 AC008761.3-201ENST00000624803 892 ntBASIC14.23□□□□□ -0.13
CXCL13O43927 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL13O43927 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL13O43927 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL13O43927 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL13O43927 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CXCL13O43927 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CXCL13O43927 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL13O43927 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL13O43927 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL13O43927 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CXCL13O43927 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL13O43927 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL13O43927 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CXCL13O43927 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL13O43927 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CXCL13O43927 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 PRAL-201ENST00000624952 3286 ntBASIC14.22□□□□□ -0.13
CXCL13O43927 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CXCL13O43927 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 TERF1P3-201ENST00000505638 1227 ntBASIC14.22□□□□□ -0.13
CXCL13O43927 SPDYE18-201ENST00000510091 1050 ntBASIC14.22□□□□□ -0.13
CXCL13O43927 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.22□□□□□ -0.13
CXCL13O43927 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL13O43927 HNRNPUP1-201ENST00000554987 333 ntBASIC14.22□□□□□ -0.13
CXCL13O43927 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.22□□□□□ -0.13
CXCL13O43927 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
CXCL13O43927 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CXCL13O43927 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CXCL13O43927 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CXCL13O43927 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL13O43927 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CXCL13O43927 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL13O43927 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CXCL13O43927 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL13O43927 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CXCL13O43927 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL13O43927 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL13O43927 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CXCL13O43927 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL13O43927 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CXCL13O43927 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL13O43927 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL13O43927 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL13O43927 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.21□□□□□ -0.13
CXCL13O43927 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.21□□□□□ -0.13
CXCL13O43927 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms