Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SPDYE11-202ENST00000450699 704 ntBASIC14.55□□□□□ -0.08
RNF13O43567 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 SPDYE9P-201ENST00000570642 692 ntBASIC14.55□□□□□ -0.08
RNF13O43567 AC027307.2-201ENST00000591252 911 ntBASIC14.55□□□□□ -0.08
RNF13O43567 SPDYE10P-202ENST00000612005 668 ntBASIC14.55□□□□□ -0.08
RNF13O43567 SPDYE8P-202ENST00000612377 668 ntBASIC14.55□□□□□ -0.08
RNF13O43567 SPTSSB-204ENST00000617024 1292 ntBASIC14.55□□□□□ -0.08
RNF13O43567 AC092902.6-201ENST00000641783 218 ntBASIC14.55□□□□□ -0.08
RNF13O43567 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF13O43567 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF13O43567 AC136621.1-201ENST00000624017 2304 ntBASIC14.55□□□□□ -0.08
RNF13O43567 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF13O43567 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF13O43567 AL161772.1-201ENST00000610494 4412 ntBASIC14.55□□□□□ -0.08
RNF13O43567 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RNF13O43567 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RNF13O43567 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 FAM45BP-202ENST00000592932 1624 ntBASIC14.55□□□□□ -0.08
RNF13O43567 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF13O43567 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF13O43567 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RNF13O43567 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF13O43567 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF13O43567 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNF13O43567 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF13O43567 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 YBX2P1-201ENST00000394192 760 ntBASIC14.54□□□□□ -0.08
RNF13O43567 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF13O43567 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RNF13O43567 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF13O43567 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RNF13O43567 AC098859.1-201ENST00000502915 1238 ntBASIC14.54□□□□□ -0.08
RNF13O43567 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF13O43567 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF13O43567 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 AC073389.1-201ENST00000595595 795 ntBASIC14.54□□□□□ -0.08
RNF13O43567 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RNF13O43567 MTDHP5-201ENST00000598980 586 ntBASIC14.54□□□□□ -0.08
RNF13O43567 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF13O43567 AC008267.7-201ENST00000624570 1194 ntBASIC14.54□□□□□ -0.08
RNF13O43567 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF13O43567 AC006486.2-201ENST00000624246 2199 ntBASIC14.54□□□□□ -0.08
RNF13O43567 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNF13O43567 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF13O43567 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
RNF13O43567 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF13O43567 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF13O43567 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF13O43567 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF13O43567 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF13O43567 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF13O43567 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF13O43567 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF13O43567 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF13O43567 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF13O43567 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms