Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC26.56■■□□□ 1.84
CUX2O14529 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 BNIP3P1-202ENST00000550043 1585 ntBASIC26.56■■□□□ 1.84
CUX2O14529 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC26.56■■□□□ 1.84
CUX2O14529 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC26.56■■□□□ 1.84
CUX2O14529 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
CUX2O14529 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC26.56■■□□□ 1.84
CUX2O14529 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC26.56■■□□□ 1.84
CUX2O14529 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CUX2O14529 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 AC243562.2-201ENST00000561247 970 ntBASIC26.55■■□□□ 1.84
CUX2O14529 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC26.55■■□□□ 1.84
CUX2O14529 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC26.55■■□□□ 1.84
CUX2O14529 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 HLA-A-202ENST00000376806 1854 ntBASIC26.55■■□□□ 1.84
CUX2O14529 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CUX2O14529 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 CYP2AB1P-202ENST00000454440 1456 ntBASIC26.55■■□□□ 1.84
CUX2O14529 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CUX2O14529 AC139713.2-201ENST00000641328 2723 ntBASIC26.55■■□□□ 1.84
CUX2O14529 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
CUX2O14529 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CUX2O14529 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 AL627231.1-201ENST00000394467 1125 ntBASIC26.55■■□□□ 1.84
CUX2O14529 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC26.55■■□□□ 1.84
CUX2O14529 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CUX2O14529 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC26.55■■□□□ 1.84
CUX2O14529 AC090857.1-201ENST00000527400 390 ntBASIC26.55■■□□□ 1.84
CUX2O14529 TPM1-223ENST00000560445 485 ntTSL 3 BASIC26.55■■□□□ 1.84
CUX2O14529 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC26.55■■□□□ 1.84
CUX2O14529 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC26.55■■□□□ 1.84
CUX2O14529 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC26.55■■□□□ 1.84
CUX2O14529 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC26.55■■□□□ 1.84
CUX2O14529 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CUX2O14529 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC26.54■■□□□ 1.84
CUX2O14529 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CUX2O14529 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC26.54■■□□□ 1.84
CUX2O14529 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC26.54■■□□□ 1.84
CUX2O14529 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC26.54■■□□□ 1.84
CUX2O14529 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CUX2O14529 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CUX2O14529 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CUX2O14529 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
CUX2O14529 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC26.53■■□□□ 1.84
CUX2O14529 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 AC020916.1-201ENST00000587762 1774 ntBASIC26.53■■□□□ 1.84
CUX2O14529 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CUX2O14529 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CUX2O14529 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CUX2O14529 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CUX2O14529 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC26.53■■□□□ 1.84
CUX2O14529 RNMTL1P1-201ENST00000454103 560 ntBASIC26.53■■□□□ 1.84
CUX2O14529 AC021723.1-201ENST00000486306 515 ntBASIC26.53■■□□□ 1.84
CUX2O14529 AC100850.1-201ENST00000506768 649 ntBASIC26.53■■□□□ 1.84
CUX2O14529 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC26.53■■□□□ 1.84
CUX2O14529 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC26.53■■□□□ 1.84
CUX2O14529 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC26.53■■□□□ 1.84
CUX2O14529 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CUX2O14529 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CUX2O14529 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CUX2O14529 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms