Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 AC055876.2-201ENST00000531834 546 ntBASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CYP4F24P-201ENST00000586049 1580 ntBASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 EEF1DP4-201ENST00000446006 880 ntBASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 GPR53P-205ENST00000457298 1084 ntBASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC104794.3-201ENST00000566840 1248 ntBASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC092850.2-201ENST00000623821 2697 ntBASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXD3Q9UJU5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 BNIP3P1-202ENST00000550043 1585 ntBASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 SPDYE19P-201ENST00000338590 713 ntBASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 AL512361.1-201ENST00000554200 418 ntBASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms