Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 AC024267.1-201ENST00000582320 895 ntBASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 MED16-214ENST00000617672 554 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 AL691432.1-201ENST00000596308 1422 ntBASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 AL031284.1-201ENST00000419297 478 ntBASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 AC098859.1-201ENST00000502915 1238 ntBASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 AC093909.1-201ENST00000504731 1122 ntBASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.99□□□□□ -0.65
CDC42SE2Q9NRR3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms