Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN18Q99952 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN18Q99952 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPN18Q99952 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PTPN18Q99952 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PTPN18Q99952 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PTPN18Q99952 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTPN18Q99952 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PTPN18Q99952 MIR769-201ENST00000390225 118 ntBASIC17.95■□□□□ 0.46
PTPN18Q99952 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN18Q99952 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 AL133466.1-201ENST00000447582 150 ntBASIC17.95■□□□□ 0.46
PTPN18Q99952 AC114812.1-204ENST00000449669 728 ntBASIC17.95■□□□□ 0.46
PTPN18Q99952 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PTPN18Q99952 SERPINA13P-202ENST00000478994 924 ntBASIC17.95■□□□□ 0.46
PTPN18Q99952 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN18Q99952 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN18Q99952 MIR7845-201ENST00000618396 99 ntBASIC17.95■□□□□ 0.46
PTPN18Q99952 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN18Q99952 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN18Q99952 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN18Q99952 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN18Q99952 AP001094.4-201ENST00000579008 2176 ntBASIC17.95■□□□□ 0.46
PTPN18Q99952 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN18Q99952 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN18Q99952 AL645608.8-201ENST00000606034 2086 ntBASIC17.95■□□□□ 0.46
PTPN18Q99952 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN18Q99952 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN18Q99952 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN18Q99952 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN18Q99952 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PTPN18Q99952 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PTPN18Q99952 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN18Q99952 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PTPN18Q99952 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PTPN18Q99952 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN18Q99952 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN18Q99952 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN18Q99952 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PTPN18Q99952 FGFR3P5-201ENST00000564496 886 ntBASIC17.94■□□□□ 0.46
PTPN18Q99952 RN7SL774P-201ENST00000577467 290 ntBASIC17.94■□□□□ 0.46
PTPN18Q99952 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 MIR3907-201ENST00000579424 151 ntBASIC17.94■□□□□ 0.46
PTPN18Q99952 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 AC244157.2-201ENST00000616239 1006 ntBASIC17.94■□□□□ 0.46
PTPN18Q99952 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PTPN18Q99952 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN18Q99952 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN18Q99952 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN18Q99952 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PTPN18Q99952 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PTPN18Q99952 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN18Q99952 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN18Q99952 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PTPN18Q99952 AC079178.1-201ENST00000420915 656 ntBASIC17.93■□□□□ 0.46
PTPN18Q99952 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.93■□□□□ 0.46
PTPN18Q99952 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PTPN18Q99952 RN7SL574P-201ENST00000581512 297 ntBASIC17.93■□□□□ 0.46
PTPN18Q99952 AL133499.1-201ENST00000596207 608 ntBASIC17.93■□□□□ 0.46
PTPN18Q99952 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.93■□□□□ 0.46
PTPN18Q99952 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN18Q99952 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN18Q99952 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN18Q99952 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms