Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AL133466.1-201ENST00000447582 150 ntBASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 IGLV3-15-201ENST00000518356 244 ntBASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 MIR4321-201ENST00000592276 80 ntBASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 RN7SL8P-201ENST00000461771 266 ntBASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 KRT18P43-201ENST00000469825 1281 ntBASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 AC091544.8-201ENST00000619490 361 ntBASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC168Q8NDH2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC007613.1-201ENST00000572811 2597 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC074338.1-201ENST00000416825 156 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 KRT18P64-201ENST00000434946 1219 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 RNA5SP486-201ENST00000515961 83 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 PGAM1P5-201ENST00000548011 764 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC148477.9-201ENST00000623974 539 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC007274.2-201ENST00000421675 662 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC098935.1-201ENST00000446057 611 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC245100.5-201ENST00000452108 331 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AL161670.2-201ENST00000557650 1227 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC009084.3-201ENST00000623356 437 ntBASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 TUBBP5-203ENST00000508529 1334 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms