Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 AC104989.1-201ENST00000519711 778 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 TDH-203ENST00000531764 1110 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.3□□□□□ -0.28
EFNA4P52798 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
EFNA4P52798 HNRNPUP1-201ENST00000554987 333 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
EFNA4P52798 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.3□□□□□ -0.28
EFNA4P52798 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.3□□□□□ -0.28
EFNA4P52798 AL022328.1-201ENST00000610050 478 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 MIR6799-201ENST00000620297 69 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA4P52798 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
EFNA4P52798 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
EFNA4P52798 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 AC018665.1-201ENST00000622927 1362 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
EFNA4P52798 FLJ38576-201ENST00000623820 2459 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA4P52798 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.29□□□□□ -0.28
EFNA4P52798 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
EFNA4P52798 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 AC092171.3-201ENST00000610122 2651 ntBASIC13.29□□□□□ -0.28
EFNA4P52798 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA4P52798 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
EFNA4P52798 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA4P52798 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA4P52798 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA4P52798 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 PTP4A1P2-201ENST00000546033 454 ntBASIC13.29□□□□□ -0.28
EFNA4P52798 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA4P52798 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA4P52798 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
EFNA4P52798 MIR5189-201ENST00000577370 114 ntBASIC13.29□□□□□ -0.28
EFNA4P52798 AL049840.4-201ENST00000602422 811 ntBASIC13.29□□□□□ -0.28
EFNA4P52798 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
EFNA4P52798 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.29□□□□□ -0.28
EFNA4P52798 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA4P52798 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA4P52798 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.29□□□□□ -0.28
EFNA4P52798 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA4P52798 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.29□□□□□ -0.28
EFNA4P52798 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA4P52798 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNA4P52798 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
EFNA4P52798 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA4P52798 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
EFNA4P52798 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA4P52798 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA4P52798 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNA4P52798 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNA4P52798 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA4P52798 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms