Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.87□□□□□ -0.03
RNF144AP50876 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RNF144AP50876 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF144AP50876 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF144AP50876 AC008677.1-201ENST00000519230 1561 ntBASIC14.87□□□□□ -0.03
RNF144AP50876 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF144AP50876 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF144AP50876 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
RNF144AP50876 KRT18P32-201ENST00000424695 1287 ntBASIC14.87□□□□□ -0.03
RNF144AP50876 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 ACTG1P14-201ENST00000446382 1122 ntBASIC14.87□□□□□ -0.03
RNF144AP50876 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF144AP50876 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF144AP50876 AC098859.1-201ENST00000502915 1238 ntBASIC14.87□□□□□ -0.03
RNF144AP50876 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF144AP50876 MIR4321-201ENST00000592276 80 ntBASIC14.87□□□□□ -0.03
RNF144AP50876 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF144AP50876 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF144AP50876 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RNF144AP50876 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF144AP50876 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RNF144AP50876 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF144AP50876 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF144AP50876 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 AP3S2-216ENST00000617003 1561 ntBASIC14.86□□□□□ -0.03
RNF144AP50876 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
RNF144AP50876 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
RNF144AP50876 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RNF144AP50876 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 KRT18P13-201ENST00000400056 1290 ntBASIC14.86□□□□□ -0.03
RNF144AP50876 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF144AP50876 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF144AP50876 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF144AP50876 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 YBX1P5-201ENST00000509441 847 ntBASIC14.86□□□□□ -0.03
RNF144AP50876 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF144AP50876 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 AC061975.2-201ENST00000581722 295 ntBASIC14.86□□□□□ -0.03
RNF144AP50876 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF144AP50876 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF144AP50876 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF144AP50876 AP001002.2-201ENST00000625137 386 ntBASIC14.86□□□□□ -0.03
RNF144AP50876 AL513210.1-201ENST00000629608 234 ntBASIC14.86□□□□□ -0.03
RNF144AP50876 AC134684.3-201ENST00000641758 218 ntBASIC14.86□□□□□ -0.03
RNF144AP50876 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RNF144AP50876 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF144AP50876 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF144AP50876 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RNF144AP50876 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF144AP50876 AC067930.6-201ENST00000623257 4947 ntBASIC14.85□□□□□ -0.03
RNF144AP50876 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms