Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PDE6BP35913 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PDE6BP35913 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.41■□□□□ 0.7
PDE6BP35913 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.41■□□□□ 0.7
PDE6BP35913 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.41■□□□□ 0.7
PDE6BP35913 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6BP35913 AL138799.1-201ENST00000448213 1675 ntBASIC19.41■□□□□ 0.7
PDE6BP35913 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6BP35913 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.41■□□□□ 0.7
PDE6BP35913 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PDE6BP35913 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6BP35913 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.41■□□□□ 0.7
PDE6BP35913 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.41■□□□□ 0.7
PDE6BP35913 AL590640.2-201ENST00000457038 527 ntBASIC19.41■□□□□ 0.7
PDE6BP35913 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6BP35913 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PDE6BP35913 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.41■□□□□ 0.7
PDE6BP35913 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.41■□□□□ 0.7
PDE6BP35913 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDE6BP35913 BX539320.1-201ENST00000623759 877 ntBASIC19.41■□□□□ 0.7
PDE6BP35913 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.41■□□□□ 0.7
PDE6BP35913 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PDE6BP35913 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE6BP35913 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6BP35913 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE6BP35913 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE6BP35913 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE6BP35913 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.4■□□□□ 0.7
PDE6BP35913 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDE6BP35913 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.4■□□□□ 0.7
PDE6BP35913 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.4■□□□□ 0.7
PDE6BP35913 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.4■□□□□ 0.7
PDE6BP35913 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE6BP35913 AC016629.1-201ENST00000596579 586 ntBASIC19.4■□□□□ 0.7
PDE6BP35913 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PDE6BP35913 AL096828.3-201ENST00000615354 462 ntBASIC19.4■□□□□ 0.7
PDE6BP35913 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE6BP35913 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PDE6BP35913 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE6BP35913 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.39■□□□□ 0.7
PDE6BP35913 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.7
PDE6BP35913 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDE6BP35913 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
PDE6BP35913 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.39■□□□□ 0.69
PDE6BP35913 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.39■□□□□ 0.69
PDE6BP35913 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 UPF3AP2-201ENST00000457924 1132 ntBASIC19.39■□□□□ 0.69
PDE6BP35913 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.39■□□□□ 0.69
PDE6BP35913 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.39■□□□□ 0.69
PDE6BP35913 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms