Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.46□□□□□ -0.25
COL8A2P25067 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.46□□□□□ -0.25
COL8A2P25067 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.46□□□□□ -0.25
COL8A2P25067 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.46□□□□□ -0.25
COL8A2P25067 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 AC068418.2-201ENST00000577309 3703 ntBASIC13.46□□□□□ -0.25
COL8A2P25067 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
COL8A2P25067 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
COL8A2P25067 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COL8A2P25067 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
COL8A2P25067 DBET-201ENST00000630918 3363 ntBASIC13.46□□□□□ -0.26
COL8A2P25067 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
COL8A2P25067 AC024909.3-201ENST00000611513 2257 ntBASIC13.46□□□□□ -0.26
COL8A2P25067 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
COL8A2P25067 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.46□□□□□ -0.26
COL8A2P25067 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
COL8A2P25067 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
COL8A2P25067 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
COL8A2P25067 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
COL8A2P25067 AC134407.2-201ENST00000625089 1978 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
COL8A2P25067 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.45□□□□□ -0.26
COL8A2P25067 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.45□□□□□ -0.26
COL8A2P25067 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.45□□□□□ -0.26
COL8A2P25067 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.45□□□□□ -0.26
COL8A2P25067 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 DFFBP1-201ENST00000433250 979 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 RN7SL692P-201ENST00000464677 288 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.45□□□□□ -0.26
COL8A2P25067 TPRX2P-201ENST00000535362 881 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 TIMM17BP1-201ENST00000545713 516 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 AC023310.3-201ENST00000557027 670 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 AC100756.1-201ENST00000562736 682 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 AC138749.3-201ENST00000567691 622 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.45□□□□□ -0.26
COL8A2P25067 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
COL8A2P25067 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.45□□□□□ -0.26
COL8A2P25067 AC116165.1-201ENST00000611806 668 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
COL8A2P25067 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.45□□□□□ -0.26
COL8A2P25067 AL358472.5-202ENST00000641448 1267 ntBASIC13.45□□□□□ -0.26
COL8A2P25067 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.45□□□□□ -0.26
COL8A2P25067 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.45□□□□□ -0.26
COL8A2P25067 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
COL8A2P25067 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.45□□□□□ -0.26
COL8A2P25067 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.45□□□□□ -0.26
COL8A2P25067 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
COL8A2P25067 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.45□□□□□ -0.26
COL8A2P25067 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL8A2P25067 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.44□□□□□ -0.26
COL8A2P25067 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.44□□□□□ -0.26
COL8A2P25067 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
COL8A2P25067 AC087499.6-201ENST00000411576 835 ntBASIC13.44□□□□□ -0.26
COL8A2P25067 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.44□□□□□ -0.26
COL8A2P25067 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.44□□□□□ -0.26
COL8A2P25067 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms