Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 TTTY23B-201ENST00000442790 549 ntBASIC16.36■□□□□ 0.21
COCHO43405 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.36■□□□□ 0.21
COCHO43405 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.36■□□□□ 0.21
COCHO43405 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.36■□□□□ 0.21
COCHO43405 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.36■□□□□ 0.21
COCHO43405 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.36■□□□□ 0.21
COCHO43405 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.36■□□□□ 0.21
COCHO43405 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
COCHO43405 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
COCHO43405 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.36■□□□□ 0.21
COCHO43405 AC024909.3-201ENST00000611513 2257 ntBASIC16.36■□□□□ 0.21
COCHO43405 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
COCHO43405 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COCHO43405 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.35■□□□□ 0.21
COCHO43405 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.35■□□□□ 0.21
COCHO43405 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COCHO43405 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COCHO43405 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 TMEM14DP-201ENST00000422205 345 ntBASIC16.35■□□□□ 0.21
COCHO43405 KRT18P43-201ENST00000469825 1281 ntBASIC16.35■□□□□ 0.21
COCHO43405 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.35■□□□□ 0.21
COCHO43405 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
COCHO43405 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.35■□□□□ 0.21
COCHO43405 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.35■□□□□ 0.21
COCHO43405 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 LINC02199-201ENST00000506655 2702 ntBASIC16.35■□□□□ 0.21
COCHO43405 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.35■□□□□ 0.21
COCHO43405 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.35■□□□□ 0.21
COCHO43405 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COCHO43405 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 AC099398.1-201ENST00000567919 2776 ntBASIC16.34■□□□□ 0.21
COCHO43405 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.34■□□□□ 0.21
COCHO43405 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.34■□□□□ 0.21
COCHO43405 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.34■□□□□ 0.21
COCHO43405 AL359711.2-201ENST00000563105 872 ntBASIC16.34■□□□□ 0.21
COCHO43405 AC133539.2-201ENST00000604757 467 ntBASIC16.34■□□□□ 0.21
COCHO43405 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.34■□□□□ 0.21
COCHO43405 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.34■□□□□ 0.21
COCHO43405 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.34■□□□□ 0.21
COCHO43405 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms