Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 CETN4P-206ENST00000642099 2168 ntBASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 BNIP3P1-202ENST00000550043 1585 ntBASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 AL136982.4-201ENST00000437689 1740 ntBASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 AC018892.3-201ENST00000623986 2499 ntBASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 TSSK5P-201ENST00000423978 907 ntBASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 FAM207CP-201ENST00000443486 507 ntBASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 BANF1P1-201ENST00000553684 263 ntBASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 AC243562.2-201ENST00000561247 970 ntBASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPDC1A2A3K4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 MRPS18AP1-201ENST00000414458 589 ntBASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 AC190387.1-201ENST00000551683 408 ntBASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms